Fish lncrna database
Web16 rows · Cancer LncRNA Census (CLC) Database of long-noncoding RNAs causally implicated in cancer through in vivo, in vitro and other evidence. BIGTranscriptome: High … WebJan 8, 2024 · LncRNADisease 2.0 documents more than 200 000 lncRNA-disease associations. We expect that this database will continue to serve as a valuable source for potential clinical application related to lncRNAs. LncRNADisease 2.0 is freely available at http://www.rnanut.net/lncrnadisease/. Publication types Research Support, Non-U.S. …
Fish lncrna database
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WebSep 23, 2024 · Noncoding RNA–protein interaction data were firstly downloaded from the NPInter 2.0 database 67. lncRNA and protein sequences were extracted from the NONCODE database 4.0 68 and the UniProt 65 ... WebLNCipedia is a public database for long non-coding RNA (lncRNA) sequence and annotation. The current release contains 127,802 transcripts and 56,946 genes. Literature. Currently, LNCipedia offers 2,482 manually curated lncRNA articles. Recently added literature. Tools. LNCipidia comes with some helpful tools: ...
WebJan 8, 2024 · Therefore, we developed a human lncRNA sets database, called LncSEA, which aimed to document a large number of available resources for human lncRNA sets and provide annotation and enrichment analyses for lncRNAs. LncSEA supports >40 000 lncRNA reference sets across 18 categories and 66 sub-categories, and covers over 50 … WebJan 30, 2024 · Lnc2Catlas ( http://lnc2catlas.bioinfotech.org/) is an atlas of long noncoding RNAs (lncRNAs) associated with cancer risk. LncRNAs are a class of functional noncoding RNAs with lengths over 200 nt...
WebApr 8, 2024 · In PC, by utilizing the GSE15471 and GSE16515 datasets and the Database for Annotation, Visualization, and Integrated Discovery (DAVID), Wang et al. conducted a functional enrichment analysis which demonstrated that the MMP9/ITGB1-miR-29b-3p-lncRNA HCP5 network was associated with the prognosis of PC . FishDB offers web services including a search tool, BLAST, JBrowse, and PrimerServer. The gene information for noncoding RNA (ncRNA), microRNA (miRNA), UTRs, and CDSs was collected and stored in the FishDB database (Fig. 1). See more The search module enables the user to collect interesting information, such as sequences, from genomes, transcriptomes, … See more The JBrowse module enables users to visualize the 88 fish genomes [17], which is a related browser to the conventional CGI-based genome … See more The blast module performs sequence similarity search employing a web-based BLAST server [16]. Users can use nucleotide BLAST … See more The PrimerServer module helps users design primers that are particular to polymerase chain reaction experiments (PCR). We used Primer3 [18] to produce candidate primer … See more
WebIntroduction. LncExpDB is a comprehensive database for lncRNA expression. It covers expression profiles of lncRNA genes across various biological contexts, predicts …
WebNov 11, 2024 · Genetically improved farmed tilapia (GIFT, Oreochromis niloticus) is a widely farmed fish in China, especially in southern China, because of its rapid ... The DE-mRNAs were further annotated at the KEGG database to identify crucial ... LncRNA-XLOC_001424 trans-regulates the expression of the gene encoding fatty acid desaturase 2 ... strait flex drywall tapeWebNov 2, 2024 · The classification of lncRNAs. The six types of lncRNAs include sense lncRNAs A, orange, antisense lncRNAs (aslncRNAs) B, yellow, bidirectional lncRNAs C, light green, enhancer lncRNAs … roto fryer instructionsWebJan 29, 2015 · Here, we used single molecule RNA FISH in single cells to characterize the sub-cellular localization patterns and abundance of 61 lncRNAs across three human cell types. rotofutWebNov 16, 2024 · In this update of NONCODE database, we collected high-confidence datasets of plant lncRNA and developed a pipeline to annotate lncRNAs in plants. The … roto fryer delonghi instructionsWebOct 5, 2024 · Long non-coding RNA Knowledgebase (lncRNAKB) is an integrated resource for exploring lncRNA biology in the context of tissue-specificity and disease association. A systematic integration of... roto fuse clutch manualWebJan 16, 2024 · From Figs. 3D, 6,025 candidate lncRNAs were captured, including 3,729 lincRNAs (61.9%), 889 antisense lncRNAs (14.8%), 1129 intronic lncRNAs (18.7%) and 278 sense lncRNAs (4.6%). roto fryer reviewWebSep 23, 2024 · Noncoding RNA–protein interaction data were firstly downloaded from the NPInter 2.0 database 67. lncRNA and protein sequences were extracted from the … strait facebook